I recently had the opportunity to present a brief overview of some of the work that BioTeam has been doing with the New York Genome Center. The format was a “webinar,” sponsored by Aspera and hosted by Bio-IT World. I spoke briefly about the data motion needs of the center. The most interesting piece to me [...]
Previous posts in this series: Ion Torrent Server API, I’d like to introduce you to the MiniLIMS API The MiniLIMS 4 column table and it’s PHP manifestation, the TypeInstance A quick round of applause for the Ion Torrent Server API Bioinformatics has been notorious for the tension between public, supported access to data and algorithms [...]
BioTeam highlights scientific LIMS software running inside a storage array appliance.
Previous posts in this series: Ion Torrent Server API, I’d like to introduce you to the MiniLIMS API The MiniLIMS 4 column table and it’s PHP manifestation, the TypeInstance I’d like to suggest a quick round of applause for the RESTful Ion Torrent Server API. I feel funny doing so; it’s like applauding a common [...]
Previous posts in this series: Ion Torrent Server API, I’d like to introduce you to the MiniLIMS API Name-value pairs If you’ve done any data modeling or database design in the last few years, particularly in bioinformatics, you’ve probably run across a name-value pair construct. Name-value pairs are often used when you have a variable [...]
I was asked to participate in a Bio-IT World web symposium on software for Next Generation DNA Sequencing. The recording of the session will be online in short order. In the meantime, here are the slides that I presented. 2011 BioIT World Slides
A PDF version of the MiniLims poster presented at the 2011 AGBT meeting is now available.
Presenter slides from the 2009 Storage for Next-Generation Sequencing Workshop(s)
